General concepts of dependency logos | Dependencies and p-values | Plotting dependency logos from data | Tuning parameters | Alphabets beyond DNA | Adding plots of sequence weights/values | Components of dependency logos and customization | Visualizing pairwise dependencies | Visualizing partitions of sequence data | Visualizing summaries of sequence data | References
Package: DepLogo 1.2.2
DepLogo: Dependency Logo
Plots dependency logos from a set of aligned input sequences.
Authors:
DepLogo_1.2.2.tar.gz
DepLogo_1.2.2.zip(r-4.7-any)DepLogo_1.2.2.zip(r-4.6-any)DepLogo_1.2.2.zip(r-4.5-any)
DepLogo_1.2.2.tgz(r-4.6-any)DepLogo_1.2.2.tgz(r-4.5-any)
DepLogo_1.2.2.tar.gz(r-4.7-any)DepLogo_1.2.2.tar.gz(r-4.6-any)
DepLogo_1.2.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
DepLogo/json (API)
| # Install 'DepLogo' in R: |
| install.packages('DepLogo', repos = c('https://jgraux.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:5d8952ce45. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 122 | ||
| source / vignettes | OK | 265 | ||
| linux-release | OK | 103 | ||
| macos-release | OK | 160 | ||
| macos-oldrel | OK | 200 | ||
| windows-devel | OK | 92 | ||
| windows-release | OK | 94 | ||
| windows-oldrel | OK | 72 | ||
| wasm-release | OK | 73 |
Exports:Alphabetalphabet.dnaalphabet.dna.gapalphabet.proteinalphabet.protein.gapalphabet.rnaalphabet.rna.gapcolorchartdeprectsDLDatafilter.by.conservationfilter.by.dependenciesfilter.by.gapsfilterColumnsgetDepsgetPWMlogopartitionplotBlocksplotDeparcsplotDeplogoplotDepmatrixreplaceColorsrevcomsubBoxessubLinessuggestColorssummary.DLData
Dependencies:
